STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000826645_02042Unannotated protein. (131 aa)    
Predicted Functional Partners:
GCA_000826645_03220
Unannotated protein.
    
 0.706
GCA_000826645_02043
Unannotated protein.
 
     0.609
GCA_000826645_02666
Unannotated protein.
  
     0.579
GCA_000826645_02754
Unannotated protein.
  
     0.553
GCA_000826645_02044
Unannotated protein.
       0.533
GCA_000826645_02041
Unannotated protein.
 
     0.526
GCA_000826645_02045
Unannotated protein.
       0.523
GCA_000826645_01791
Unannotated protein.
  
     0.508
GCA_000826645_01482
Unannotated protein.
  
     0.504
GCA_000826645_00933
Unannotated protein.
  
     0.451
Your Current Organism:
Psychroserpens mesophilus
NCBI taxonomy Id: 325473
Other names: JCM 13413, KCCM 42261, P. mesophilus, Psychroserpens mesophilus Kwon et al. 2006, strain KOPRI 13649
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.