Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KGE53360.1Sel1 repeat-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)    
Predicted Functional Partners:
KGE53359.1
Fe(II)-dependent oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.903
KGE51338.1
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.793
KGE52288.1
Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.
   
 
 0.771
KGE51973.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.770
KGE52009.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.756
KGE51103.1
Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.733
flgB
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
    
 
 0.722
fliE
Flagellar hook-basal body protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.719
flgH
Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
    
 
 0.710
KGE52286.1
Flagellar hook protein FlgE; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.707
Your Current Organism:
Xanthomonas axonopodis
NCBI taxonomy Id: 325777
Other names: X. axonopodis pv. vasculorum, Xanthomonas axonopodis pv. vasculorum
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