STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGE52488.1Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (111 aa)    
Predicted Functional Partners:
KGE52489.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.796
KGE50274.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.772
KGE50412.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.770
KGE51616.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.695
KGE51671.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.459
KGE51670.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.458
KGE50691.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.458
KGE51651.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.451
KGE51615.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.451
KGE50433.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.448
Your Current Organism:
Xanthomonas axonopodis
NCBI taxonomy Id: 325777
Other names: X. axonopodis pv. vasculorum, Xanthomonas axonopodis pv. vasculorum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.