STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGE51243.1General secretion pathway protein GspI; Derived by automated computational analysis using gene prediction method: Protein Homology. (138 aa)    
Predicted Functional Partners:
KGE51242.1
General secretion pathway protein GspJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
KGE51241.1
General secretion pathway protein GspK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.996
KGE51244.1
General secretion pathway protein GspH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.972
KGE51239.1
General secretion pathway protein GspM; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.967
KGE51245.1
General secretion pathway protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.956
KGE51237.1
General secretion pathway protein GspD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.954
KGE51240.1
General secretion pathway protein GspL; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.950
KGE51246.1
General secretion pathway protein GspF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.928
KGE51238.1
General secretion pathway protein GspN; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.905
KGE51247.1
General secretion pathway protein GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 0.897
Your Current Organism:
Xanthomonas axonopodis
NCBI taxonomy Id: 325777
Other names: X. axonopodis pv. vasculorum, Xanthomonas axonopodis pv. vasculorum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.