STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGE50736.1Energy transducer TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (329 aa)    
Predicted Functional Partners:
KGE52798.1
Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.940
KGE53751.1
Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.855
KGE53749.1
Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.822
KGE53750.1
Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.803
KGE53752.1
Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.789
KGE53054.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.789
tolQ
Colicin transporter; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 0.786
KGE52166.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.782
KGE52949.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.771
KGE53747.1
TPR domain protein, component of TonB system; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.762
Your Current Organism:
Xanthomonas axonopodis
NCBI taxonomy Id: 325777
Other names: X. axonopodis pv. vasculorum, Xanthomonas axonopodis pv. vasculorum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.