STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sama_1197N-acetylglucosamine kinase; KEGG: spt:SPA1630 putative ROK-family protein. (335 aa)    
Predicted Functional Partners:
Sama_1198
KEGG: son:SO3505 N-acetylglucosamine-6-phosphate deacetylase; Belongs to the metallo-dependent hydrolases superfamily. NagA family.
 
 
 0.980
Sama_1133
KEGG: son:SO1623 PTS system, glucose-specific IIBC component.
  
 
 0.958
Sama_0946
KEGG: son:SO3505 N-acetylglucosamine-6-phosphate deacetylase; Belongs to the metallo-dependent hydrolases superfamily. NagA family.
 
 
 0.917
Sama_0943
beta-N-acetylhexosaminidase; KEGG: son:SO3509 beta-hexosaminidase b precursor.
  
 
 0.906
nagZ
Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.
    
 0.904
Sama_2815
KEGG: son:SO3635 hypothetical phosphotransferase.
     
  0.900
Sama_1194
Oxidoreductase, Gfo/Idh/MocA family; Glycosidase.
 
   
 0.832
Sama_1196
KEGG: vvy:VVA1515 predicted phosphosugar isomerase.
 
     0.822
Sama_1195
Tagatose-bisphosphate aldolase noncatalytic subunit; KEGG: shm:Shewmr7_2601 tagatose-6-phosphate kinase.
 
     0.817
Sama_1193
KEGG: vfi:VFA1006 transcriptional regulator, GlpR family.
       0.723
Your Current Organism:
Shewanella amazonensis
NCBI taxonomy Id: 326297
Other names: S. amazonensis SB2B, Shewanella amazonensis SB2B, Shewanella amazonensis str. SB2B, Shewanella amazonensis strain SB2B
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