Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Sama_0521 | Sama_1936 | KEGG: cps:CPS_0936 TonB-dependent receptor. | KEGG: son:SO2583 hypothetical protein. | 0.493 |
Sama_0521 | Sama_2083 | KEGG: cps:CPS_0936 TonB-dependent receptor. | KEGG: pha:PSHAa0696 hypothetical protein. | 0.603 |
Sama_0521 | Sama_3208 | KEGG: cps:CPS_0936 TonB-dependent receptor. | KEGG: son:SO4205 hypothetical protein. | 0.660 |
Sama_0523 | Sama_2078 | KEGG: cps:CPS_0939 sensory box sensor histidine kinase/response regulator. | KEGG: son:SO2742 sensor histidine kinase/response regulator. | 0.440 |
Sama_0523 | Sama_2083 | KEGG: cps:CPS_0939 sensory box sensor histidine kinase/response regulator. | KEGG: pha:PSHAa0696 hypothetical protein. | 0.479 |
Sama_0653 | Sama_2083 | KEGG: son:SO0757 TPR domain protein. | KEGG: pha:PSHAa0696 hypothetical protein. | 0.416 |
Sama_0653 | Sama_3208 | KEGG: son:SO0757 TPR domain protein. | KEGG: son:SO4205 hypothetical protein. | 0.698 |
Sama_0914 | Sama_2078 | OmpA/MotB; KEGG: sdn:Sden_2732 OmpA/MotB; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | KEGG: son:SO2742 sensor histidine kinase/response regulator. | 0.428 |
Sama_0914 | Sama_2083 | OmpA/MotB; KEGG: sdn:Sden_2732 OmpA/MotB; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | KEGG: pha:PSHAa0696 hypothetical protein. | 0.412 |
Sama_1252 | Sama_1936 | KEGG: cps:CPS_3757 TonB-dependent receptor. | KEGG: son:SO2583 hypothetical protein. | 0.692 |
Sama_1252 | Sama_2083 | KEGG: cps:CPS_3757 TonB-dependent receptor. | KEGG: pha:PSHAa0696 hypothetical protein. | 0.458 |
Sama_1252 | Sama_3208 | KEGG: cps:CPS_3757 TonB-dependent receptor. | KEGG: son:SO4205 hypothetical protein. | 0.409 |
Sama_1936 | Sama_0521 | KEGG: son:SO2583 hypothetical protein. | KEGG: cps:CPS_0936 TonB-dependent receptor. | 0.493 |
Sama_1936 | Sama_1252 | KEGG: son:SO2583 hypothetical protein. | KEGG: cps:CPS_3757 TonB-dependent receptor. | 0.692 |
Sama_1936 | Sama_2083 | KEGG: son:SO2583 hypothetical protein. | KEGG: pha:PSHAa0696 hypothetical protein. | 0.489 |
Sama_2078 | Sama_0523 | KEGG: son:SO2742 sensor histidine kinase/response regulator. | KEGG: cps:CPS_0939 sensory box sensor histidine kinase/response regulator. | 0.440 |
Sama_2078 | Sama_0914 | KEGG: son:SO2742 sensor histidine kinase/response regulator. | OmpA/MotB; KEGG: sdn:Sden_2732 OmpA/MotB; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | 0.428 |
Sama_2078 | Sama_2083 | KEGG: son:SO2742 sensor histidine kinase/response regulator. | KEGG: pha:PSHAa0696 hypothetical protein. | 0.447 |
Sama_2083 | Sama_0521 | KEGG: pha:PSHAa0696 hypothetical protein. | KEGG: cps:CPS_0936 TonB-dependent receptor. | 0.603 |
Sama_2083 | Sama_0523 | KEGG: pha:PSHAa0696 hypothetical protein. | KEGG: cps:CPS_0939 sensory box sensor histidine kinase/response regulator. | 0.479 |
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