STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sama_2609KEGG: son:SO3838 methyl-accepting chemotaxis protein. (621 aa)    
Predicted Functional Partners:
Sama_2277
Putative CheA signal transduction histidine kinase; KEGG: son:SO3207 chemotaxis protein.
 
 0.975
Sama_3495
CheA signal transduction histidine kinase; KEGG: hch:HCH_00455 chemotaxis protein histidine kinase and related kinase.
 
 0.974
Sama_2272
CheW protein; KEGG: son:SO3202 purine-binding chemotaxis protein CheW.
 
 0.950
Sama_3496
KEGG: sde:Sde_3106 biotin synthase.
 
 0.942
Sama_2319
MCP methyltransferase, CheR-type; KEGG: son:SO3251 chemotaxis protein methyltransferase CheR.
 
 0.935
cheB
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.933
Sama_3498
MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 
 0.931
Sama_2320
Response regulator receiver modulated CheW protein; KEGG: son:SO3252 chemotaxis protein CheV.
 
 0.927
cheB-2
Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.927
Sama_2032
Response regulator receiver modulated CheW protein; KEGG: son:SO1989 chemotaxis protein CheV.
 
 0.926
Your Current Organism:
Shewanella amazonensis
NCBI taxonomy Id: 326297
Other names: S. amazonensis SB2B, Shewanella amazonensis SB2B, Shewanella amazonensis str. SB2B, Shewanella amazonensis strain SB2B
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