STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sama_3095KEGG: son:SO3967 hypothetical protein. (290 aa)    
Predicted Functional Partners:
Sama_3530
Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
 0.958
Sama_3529
KEGG: son:SO4448 molybdenum ABC transporter, periplasmic molybdenum-binding protein.
  
  
  0.930
Sama_3531
KEGG: son:SO4446 molybdenum ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
    
 0.810
Sama_0120
Molybdopterin biosynthesis MoeA protein, putative; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
    
 0.735
Sama_0138
Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
    
 0.577
Sama_3094
KEGG: pae:PA0914 hypothetical protein.
       0.527
Sama_3096
KEGG: son:SO3969 OmpA family protein.
  
    0.506
Sama_1506
Cysteine desulfurase; KEGG: cps:CPS_0838 aminotransferase, class V.
  
  
 0.491
Sama_3616
KEGG: son:SO4506 iron-sulfur cluster-binding protein.
 
  
 0.473
Sama_3620
KEGG: son:SO4502 hypothetical protein.
 
   
 0.461
Your Current Organism:
Shewanella amazonensis
NCBI taxonomy Id: 326297
Other names: S. amazonensis SB2B, Shewanella amazonensis SB2B, Shewanella amazonensis str. SB2B, Shewanella amazonensis strain SB2B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.