Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABB43405.1 | ABB43406.1 | Suden_0124 | Suden_0125 | Conserved hypothetical protein. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.675 |
ABB43405.1 | ABB43408.1 | Suden_0124 | Suden_0127 | Conserved hypothetical protein. | Hypothetical protein. | 0.648 |
ABB43405.1 | ABB43409.1 | Suden_0124 | Suden_0128 | Conserved hypothetical protein. | Type II site-specific deoxyribonuclease. | 0.408 |
ABB43405.1 | ABB43410.1 | Suden_0124 | Suden_0129 | Conserved hypothetical protein. | N-6 DNA methylase. | 0.408 |
ABB43405.1 | ABB43411.1 | Suden_0124 | Suden_0130 | Conserved hypothetical protein. | Site-specific DNA-methyltransferase (adenine-specific). | 0.408 |
ABB43405.1 | dxr | Suden_0124 | Suden_0126 | Conserved hypothetical protein. | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 0.675 |
ABB43405.1 | tsaD | Suden_0124 | Suden_0131 | Conserved hypothetical protein. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.444 |
ABB43406.1 | ABB43405.1 | Suden_0125 | Suden_0124 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | Conserved hypothetical protein. | 0.675 |
ABB43406.1 | ABB43408.1 | Suden_0125 | Suden_0127 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | Hypothetical protein. | 0.773 |
ABB43406.1 | ABB43409.1 | Suden_0125 | Suden_0128 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | Type II site-specific deoxyribonuclease. | 0.474 |
ABB43406.1 | ABB43410.1 | Suden_0125 | Suden_0129 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | N-6 DNA methylase. | 0.474 |
ABB43406.1 | ABB43411.1 | Suden_0125 | Suden_0130 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | Site-specific DNA-methyltransferase (adenine-specific). | 0.474 |
ABB43406.1 | dxr | Suden_0125 | Suden_0126 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 0.935 |
ABB43406.1 | tsaD | Suden_0125 | Suden_0131 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.516 |
ABB43408.1 | ABB43405.1 | Suden_0127 | Suden_0124 | Hypothetical protein. | Conserved hypothetical protein. | 0.648 |
ABB43408.1 | ABB43406.1 | Suden_0127 | Suden_0125 | Hypothetical protein. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.773 |
ABB43408.1 | ABB43409.1 | Suden_0127 | Suden_0128 | Hypothetical protein. | Type II site-specific deoxyribonuclease. | 0.474 |
ABB43408.1 | ABB43410.1 | Suden_0127 | Suden_0129 | Hypothetical protein. | N-6 DNA methylase. | 0.474 |
ABB43408.1 | ABB43411.1 | Suden_0127 | Suden_0130 | Hypothetical protein. | Site-specific DNA-methyltransferase (adenine-specific). | 0.474 |
ABB43408.1 | dxr | Suden_0127 | Suden_0126 | Hypothetical protein. | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 0.775 |
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