STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB43546.1Hypothetical protein. (493 aa)    
Predicted Functional Partners:
ABB43545.1
Sulfate thiol esterase SoxB; Belongs to the 5'-nucleotidase family.
  
    0.677
ABB43544.1
Diheme cytochrome SoxA (sulfur oxidation).
       0.667
ABB43543.1
Sulfur compound chelating protein SoxZ.
       0.657
ABB43548.1
Conserved hypothetical protein.
       0.548
ABB43547.1
Hypothetical protein.
       0.545
ABB43542.1
Thiosulfate-binding protein SoxY.
       0.522
ABB43541.1
Monoheme cytochrome SoxX.
  
    0.509
ABB43549.1
Hypothetical protein.
       0.505
Your Current Organism:
Sulfurimonas denitrificans
NCBI taxonomy Id: 326298
Other names: S. denitrificans DSM 1251, Sulfurimonas denitrificans DSM 1251, Thiomicrospira denitrificans ATCC 33889
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.