STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB43677.1C-type cytochrome, putative. (102 aa)    
Predicted Functional Partners:
ABB44051.1
Heavy metal transport/detoxification protein.
  
     0.728
ABB45334.1
Sulfur dehydrogenase subunit SoxC.
   
 
 0.717
ABB43678.1
Heat shock protein DnaJ-like protein.
       0.601
ABB43898.1
Sulfide: quinone oxidoreductase.
 
   
 0.591
ABB44820.1
Biopolymer transport protein ExbD/TolR.
  
     0.489
ABB44069.1
Hypothetical protein.
  
     0.481
ABB43866.1
Conserved hypothetical protein.
  
     0.461
ABB43679.1
Hypothetical protein.
       0.448
ABB43680.1
Hypothetical protein.
       0.430
ABB43681.1
Protein of unknown function DUF6, transmembrane.
 
     0.426
Your Current Organism:
Sulfurimonas denitrificans
NCBI taxonomy Id: 326298
Other names: S. denitrificans DSM 1251, Sulfurimonas denitrificans DSM 1251, Thiomicrospira denitrificans ATCC 33889
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