STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB43906.1MotA/TolQ/ExbB proton channel. (149 aa)    
Predicted Functional Partners:
ABB43907.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.976
ABB43558.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.905
ABB44281.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.861
ABB44820.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.830
ABB43905.1
Histidine kinase.
       0.774
ABB44677.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.717
ABB43923.1
TonB-like protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.713
ABB44282.1
TonB-like protein.
 
 
 0.685
ABB44821.1
TonB-like protein.
 
 
 0.676
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.
       0.617
Your Current Organism:
Sulfurimonas denitrificans
NCBI taxonomy Id: 326298
Other names: S. denitrificans DSM 1251, Sulfurimonas denitrificans DSM 1251, Thiomicrospira denitrificans ATCC 33889
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.