STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB43976.1N-6 DNA methylase. (530 aa)    
Predicted Functional Partners:
ABB44222.1
Restriction modification system DNA specificity domain.
 
 
 0.959
ABB44226.1
Type I site-specific deoxyribonuclease HsdR; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.943
ABB43977.1
Hypothetical protein.
  
 
 0.888
ABB44219.1
Restriction modification system DNA specificity domain.
 
 
 0.791
ABB43816.1
N-6 DNA methylase.
  
     0.762
ABB43979.1
ATPase.
  
  
 0.734
ABB43978.1
Hypothetical protein.
       0.636
ABB43980.1
Hypothetical protein.
       0.636
ABB44872.1
Hypothetical protein.
  
 
 0.527
ABB43975.1
Transposase.
       0.511
Your Current Organism:
Sulfurimonas denitrificans
NCBI taxonomy Id: 326298
Other names: S. denitrificans DSM 1251, Sulfurimonas denitrificans DSM 1251, Thiomicrospira denitrificans ATCC 33889
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.