Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABB44205.1 | ABB44206.1 | Suden_0927 | Suden_0928 | Hypothetical protein. | Calcium-binding EF-hand. | 0.947 |
ABB44205.1 | ABB44207.1 | Suden_0927 | Suden_0929 | Hypothetical protein. | Adenylate/guanylate cyclase. | 0.957 |
ABB44205.1 | ABB44208.1 | Suden_0927 | Suden_0930 | Hypothetical protein. | Metal dependent phosphohydrolase. | 0.953 |
ABB44205.1 | ABB44209.1 | Suden_0927 | Suden_0931 | Hypothetical protein. | Conserved hypothetical protein. | 0.478 |
ABB44205.1 | ABB44210.1 | Suden_0927 | Suden_0932 | Hypothetical protein. | ABC-1. | 0.543 |
ABB44206.1 | ABB44205.1 | Suden_0928 | Suden_0927 | Calcium-binding EF-hand. | Hypothetical protein. | 0.947 |
ABB44206.1 | ABB44207.1 | Suden_0928 | Suden_0929 | Calcium-binding EF-hand. | Adenylate/guanylate cyclase. | 0.952 |
ABB44206.1 | ABB44208.1 | Suden_0928 | Suden_0930 | Calcium-binding EF-hand. | Metal dependent phosphohydrolase. | 0.917 |
ABB44206.1 | ABB44209.1 | Suden_0928 | Suden_0931 | Calcium-binding EF-hand. | Conserved hypothetical protein. | 0.478 |
ABB44206.1 | ABB44210.1 | Suden_0928 | Suden_0932 | Calcium-binding EF-hand. | ABC-1. | 0.478 |
ABB44207.1 | ABB44205.1 | Suden_0929 | Suden_0927 | Adenylate/guanylate cyclase. | Hypothetical protein. | 0.957 |
ABB44207.1 | ABB44206.1 | Suden_0929 | Suden_0928 | Adenylate/guanylate cyclase. | Calcium-binding EF-hand. | 0.952 |
ABB44207.1 | ABB44208.1 | Suden_0929 | Suden_0930 | Adenylate/guanylate cyclase. | Metal dependent phosphohydrolase. | 0.972 |
ABB44207.1 | ABB44209.1 | Suden_0929 | Suden_0931 | Adenylate/guanylate cyclase. | Conserved hypothetical protein. | 0.478 |
ABB44207.1 | ABB44210.1 | Suden_0929 | Suden_0932 | Adenylate/guanylate cyclase. | ABC-1. | 0.552 |
ABB44208.1 | ABB44205.1 | Suden_0930 | Suden_0927 | Metal dependent phosphohydrolase. | Hypothetical protein. | 0.953 |
ABB44208.1 | ABB44206.1 | Suden_0930 | Suden_0928 | Metal dependent phosphohydrolase. | Calcium-binding EF-hand. | 0.917 |
ABB44208.1 | ABB44207.1 | Suden_0930 | Suden_0929 | Metal dependent phosphohydrolase. | Adenylate/guanylate cyclase. | 0.972 |
ABB44208.1 | ABB44209.1 | Suden_0930 | Suden_0931 | Metal dependent phosphohydrolase. | Conserved hypothetical protein. | 0.478 |
ABB44208.1 | ABB44210.1 | Suden_0930 | Suden_0932 | Metal dependent phosphohydrolase. | ABC-1. | 0.485 |
page 1 of 3