Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABB44249.1 | ABB44252.1 | Suden_0971 | Suden_0974 | CheW protein. | CheA signal transduction histidine kinases. | 0.999 |
ABB44249.1 | ABB44253.1 | Suden_0971 | Suden_0975 | CheW protein. | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.967 |
ABB44249.1 | ABB44266.1 | Suden_0971 | Suden_0988 | CheW protein. | Methyl-accepting chemotaxis sensory transducer. | 0.966 |
ABB44249.1 | ABB44535.1 | Suden_0971 | Suden_1257 | CheW protein. | Response regulator receiver (CheY-like) modulated CheW protein. | 0.830 |
ABB44249.1 | ABB44806.1 | Suden_0971 | Suden_1529 | CheW protein. | CheW protein. | 0.916 |
ABB44249.1 | ABB44807.1 | Suden_0971 | Suden_1530 | CheW protein. | CheA signal transduction histidine kinases. | 0.998 |
ABB44249.1 | ABB44832.1 | Suden_0971 | Suden_1555 | CheW protein. | Putative CheA signal transduction histidine kinases. | 0.994 |
ABB44249.1 | ABB45213.1 | Suden_0971 | Suden_1939 | CheW protein. | CheB methylesterase. | 0.962 |
ABB44249.1 | ABB45214.1 | Suden_0971 | Suden_1940 | CheW protein. | MCP methyltransferase, CheR-type. | 0.862 |
ABB44249.1 | cheB | Suden_0971 | Suden_0978 | CheW protein. | Response regulator receiver (CheY-like) modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.988 |
ABB44252.1 | ABB44249.1 | Suden_0974 | Suden_0971 | CheA signal transduction histidine kinases. | CheW protein. | 0.999 |
ABB44252.1 | ABB44253.1 | Suden_0974 | Suden_0975 | CheA signal transduction histidine kinases. | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.973 |
ABB44252.1 | ABB44266.1 | Suden_0974 | Suden_0988 | CheA signal transduction histidine kinases. | Methyl-accepting chemotaxis sensory transducer. | 0.971 |
ABB44252.1 | ABB44535.1 | Suden_0974 | Suden_1257 | CheA signal transduction histidine kinases. | Response regulator receiver (CheY-like) modulated CheW protein. | 0.997 |
ABB44252.1 | ABB44806.1 | Suden_0974 | Suden_1529 | CheA signal transduction histidine kinases. | CheW protein. | 0.995 |
ABB44252.1 | ABB44807.1 | Suden_0974 | Suden_1530 | CheA signal transduction histidine kinases. | CheA signal transduction histidine kinases. | 0.946 |
ABB44252.1 | ABB44832.1 | Suden_0974 | Suden_1555 | CheA signal transduction histidine kinases. | Putative CheA signal transduction histidine kinases. | 0.930 |
ABB44252.1 | ABB45213.1 | Suden_0974 | Suden_1939 | CheA signal transduction histidine kinases. | CheB methylesterase. | 0.994 |
ABB44252.1 | ABB45214.1 | Suden_0974 | Suden_1940 | CheA signal transduction histidine kinases. | MCP methyltransferase, CheR-type. | 0.884 |
ABB44252.1 | cheB | Suden_0974 | Suden_0978 | CheA signal transduction histidine kinases. | Response regulator receiver (CheY-like) modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.998 |
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