STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB44716.1Transcriptional regulator, TetR family. (196 aa)    
Predicted Functional Partners:
ABB44714.1
Nickel-dependent hydrogenase, large subunit.
 
     0.880
ABB44715.1
Ni-Fe hydrogenase, small subunit.
 
   
 0.840
ABB45327.1
Membrane protein involved in aromatic hydrocarbon degradation.
  
     0.586
ABB44127.1
Thioesterase superfamily.
  
   
 0.583
ABB44718.1
Putative efflux transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
     
 0.539
ABB44702.1
(NiFe)-hydrogenase maturation factor, HypX/HoxX type.
 
  
 0.523
ABB44713.1
Ni-Fe hydrogenase, small subunit.
     
 0.516
ABB44711.1
Nickel-dependent hydrogenase b-type cytochrome subunit.
       0.515
ABB44712.1
Nickel-dependent hydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
       0.514
ABB44719.1
Outer membrane efflux protein.
     
 0.514
Your Current Organism:
Sulfurimonas denitrificans
NCBI taxonomy Id: 326298
Other names: S. denitrificans DSM 1251, Sulfurimonas denitrificans DSM 1251, Thiomicrospira denitrificans ATCC 33889
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.