STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB44986.1Na-Ca exchanger/integrin-beta4. (399 aa)    
Predicted Functional Partners:
ABB44991.1
Hemolysin-type calcium-binding region.
  
 
   0.807
ABB43524.1
Hemolysin-type calcium-binding region.
  
     0.757
ABB44983.1
Type I secretion system ATPase, PrtD.
 
   
 0.697
ABB44982.1
Type I secretion membrane fusion protein, HlyD.
 
  
 0.646
ABB43527.1
Hypothetical protein.
 
 
 0.640
ABB44704.1
Hypothetical protein.
  
     0.600
ABB44981.1
Outer membrane efflux protein.
 
    0.567
ABB44316.1
Cell divisionFtsK/SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family.
    
 
 0.524
ABB44987.1
Hypothetical protein.
       0.493
ABB44985.1
Hypothetical protein.
       0.480
Your Current Organism:
Sulfurimonas denitrificans
NCBI taxonomy Id: 326298
Other names: S. denitrificans DSM 1251, Sulfurimonas denitrificans DSM 1251, Thiomicrospira denitrificans ATCC 33889
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.