STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB45124.1AMMECR1. (190 aa)    
Predicted Functional Partners:
ABB45122.1
Protein of unknown function DUF52; Belongs to the MEMO1 family.
    0.997
ABB45123.1
Radical SAM.
 
     0.951
ABB45121.1
Conserved hypothetical protein.
       0.773
ABB45125.1
Conserved hypothetical protein.
       0.768
ABB45120.1
Protein of unknown function DUF475.
       0.618
ABB45126.1
ATPase.
       0.599
ABB45127.1
ATPase.
       0.599
ABB45128.1
DNA mismatch repair enzyme MutH.
       0.456
ABB45129.1
DNA (cytosine-5-)-methyltransferase.
       0.456
ABB45119.1
Conserved hypothetical protein.
       0.401
Your Current Organism:
Sulfurimonas denitrificans
NCBI taxonomy Id: 326298
Other names: S. denitrificans DSM 1251, Sulfurimonas denitrificans DSM 1251, Thiomicrospira denitrificans ATCC 33889
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.