STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB45361.1Putative PAS/PAC sensor protein. (240 aa)    
Predicted Functional Partners:
ABB45362.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
 
 0.825
ABB45215.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
 0.552
ABB43698.1
Putative PAS/PAC sensor protein.
  
     0.528
ABB43529.1
Histidine kinase.
  
 
 0.524
ABB43808.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
 
0.507
ABB43387.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
 
 0.465
ABB45277.1
Diguanylate cyclase/phosphodiesterase.
 
  
   0.463
ABB45289.1
Diguanylate cyclase (GGDEF domain).
 
  
   0.455
ABB44888.1
Deoxyribodipyrimidine photo-lyase type I; Belongs to the DNA photolyase family.
  
     0.442
ABB45199.1
Response regulator receiver domain protein (CheY-like).
  
 
 0.428
Your Current Organism:
Sulfurimonas denitrificans
NCBI taxonomy Id: 326298
Other names: S. denitrificans DSM 1251, Sulfurimonas denitrificans DSM 1251, Thiomicrospira denitrificans ATCC 33889
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