STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL0195Hydantoin racemase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (259 aa)    
Predicted Functional Partners:
FRAAL0377
Hydantoin racemase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 
0.927
FRAAL1460
Putative allantoinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
    
 0.913
FRAAL0197
Putative Acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
     0.725
FRAAL0376
Cytosine/purine/uracil/thiamine/allantoin permease family protein; Function of strongly homologous gene; transporter.
 
     0.702
FRAAL0196
Putative acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.682
FRAAL0194
Putative short chain dehydrogenase/reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
     0.614
FRAAL0193
Putative Enoyl-CoA hydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the enoyl-CoA hydratase/isomerase family.
 
     0.508
FRAAL0583
Putative MarR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
     0.491
FRAAL0198
Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
     0.482
FRAAL0191
Hypothetical protein; No homology to any previously reported sequences.
 
     0.472
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.