STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL0200NAD+-dependent aldehyde dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (519 aa)    
Predicted Functional Partners:
FRAAL0199
Alcohol dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 
 0.686
FRAAL0201
Putative cytochrome P450 reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the cytochrome P450 family.
  
 
 0.635
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
      
 0.602
sucA
2-oxoglutarate dehydrogenase, E1 component (SucA); Function of strongly homologous gene; enzyme.
  
 0.566
FRAAL2096
Putative fatty acid oxidation complex alpha-subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 0.476
FRAAL3253
Pyruvate-flavodoxin oxidoreductase; Function of strongly homologous gene; enzyme.
  
 
 0.460
pdhA
Pyruvate dehydrogenase E1 component, alpha subunit; Function of strongly homologous gene; enzyme.
  
 0.455
pdhB
Pyruvate dehydrogenase, beta subunit (Lipoamide). (pdhB-2); Function of strongly homologous gene; enzyme.
  
 0.455
acnA
Aconitate hydratase 1; Function of strongly homologous gene; enzyme.
  
 0.452
fumC
Fumarase C (fumarate hydratase Class II); Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
   
 0.451
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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