Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FRAAL0809Putative P-loop ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (380 aa)    
Predicted Functional Partners:
FRAAL0810
Putative guanylate kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.794
FRAAL0811
Hypothetical protein; No homology to any previously reported sequences.
       0.794
FRAAL6315
Hypothetical protein; No homology to any previously reported sequences.
 
  
 0.561
otsB
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.455
FRAAL2654
Hypothetical protein; No homology to any previously reported sequences.
  
   
 0.428
FRAAL2289
Putative two-component sensor kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
    0.401
FRAAL4359
Probable transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
  
 0.400
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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