STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugdUDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH); Function of strongly homologous gene; enzyme. (447 aa)    
Predicted Functional Partners:
galU
UTP--glucose-1-phosphate uridylyltransferase; Function of strongly homologous gene; enzyme.
 
 0.972
FRAAL5662
Putative GDP-D-mannose dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 0.969
FRAAL0508
Putative UDP-glucose 4-epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 0.959
FRAAL6008
Putative UDP-glucose 4-epimerase (UDP-galactose 4-epimerase); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 0.952
FRAAL3731
Putative nucleoside-diphosphate-sugar epimerase (N-terminal); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 0.948
galE
UDP-glucose 4-epimerase; Function of strongly homologous gene; enzyme.
  
 0.938
FRAAL3239
Hypothetical protein; No homology to any previously reported sequences.
  
 0.938
FRAAL1490
Putative UDP-galactose 4-epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 
 0.926
galE-2
UDP-galactose 4-epimerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.915
udgA
UDP-glucose 6-dehydrogenase; Function of strongly homologous gene; enzyme.
  
  
 
0.902
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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