STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL1237Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (479 aa)    
Predicted Functional Partners:
FRAAL1238
ABC transporter ATP-binding protein (partial match); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
  
 0.906
FRAAL1235
Putative Glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
  
 0.892
FRAAL1239
Putative Polysaccharide ABC transport integral membrane subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
  
 0.887
FRAAL1236
Putative Glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 0.861
FRAAL1230
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.777
FRAAL1254
Putative DTDP-Rha:a-D-GlcNAc-diphosphoryl polyprenol, a-3-L-rhamnosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
     0.771
FRAAL4109
Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
     0.769
FRAAL2046
Putative Glycosyl transferase-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
     0.760
FRAAL2032
Putative glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
     0.759
FRAAL6262
Hypothetical protein; No homology to any previously reported sequences.
  
     0.751
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.