STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL1254Putative DTDP-Rha:a-D-GlcNAc-diphosphoryl polyprenol, a-3-L-rhamnosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (319 aa)    
Predicted Functional Partners:
FRAAL4600
Putative glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
  
  0.975
FRAAL2046
Putative Glycosyl transferase-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
  
 
0.929
FRAAL4109
Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
  
 
0.929
FRAAL6262
Hypothetical protein; No homology to any previously reported sequences.
  
  
 
0.928
FRAAL1230
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.817
rfbC
DTDP-4-dehydrorhamnose 3,5-epimerase; Function of strongly homologous gene; enzyme.
 
  
 0.796
FRAAL1237
Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
     0.771
FRAAL2032
Putative glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
     0.769
FRAAL1252
Putative Glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
  
 0.761
FRAAL1253
Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
  
 0.758
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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