STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
FRAAL1663Putative long-chain-fatty-acid--CoA ligase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (552 aa)    
Predicted Functional Partners:
FRAAL4071
Putative Enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 0.927
FRAAL0349
Putative 6-methylsalicylic acid synthase; Function of strongly homologous gene; enzyme.
  
 0.916
FRAAL2562
Putative Type I polyketide synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 0.916
FRAAL2563
Putative type 1 Modular polyketide synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 0.900
FRAAL2560
Putative modular polyketide synthase (loading and extender module); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 0.877
FRAAL2561
Putative type I polyketide synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 0.865
FRAAL1289
Putative Polyketide synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 0.862
FRAAL2989
Putative polyketide synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 0.862
FRAAL0347
Putative Type I modular polyketide synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 0.861
FRAAL2557
Non-ribosomal peptide synthetase (Fragment); Function of strongly homologous gene; enzyme.
  
 0.807
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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