STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL1922Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (241 aa)    
Predicted Functional Partners:
FRAAL1921
Putative Fe-S oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
    0.979
FRAAL5982
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.749
mrdB
Rod shape-determining membrane protein; Function of strongly homologous gene; structural protein; Belongs to the SEDS family.
       0.680
FRAAL5135
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.628
FRAAL1923
Ribonuclease E homolog; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.626
FRAAL1917
Rod shape-determining protein; Involved in formation and maintenance of cell shape.
 
     0.560
FRAAL1918
Putative rod shape-determining protein MreD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; structural protein.
       0.495
FRAAL1919
Penicillin-binding protein 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.495
rimO
Conserved hypothetical protein; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
 
     0.472
FRAAL1153
Putative secreted lipase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
     0.418
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.