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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL2012Putative cytidine deaminase (Cytidine aminohydrolase) (CDA); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (134 aa)    
Predicted Functional Partners:
era
Putative GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
  
  
 0.943
ybeY
Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.939
FRAAL2011
Putative membrane protein containing CBS domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
    0.864
FRAAL2009
Phosphate starvation-inducible protein PhoH and related proteins; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.848
FRAAL0944
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.759
deoA
Thymidine phosphorylase; Function of strongly homologous gene; enzyme.
 
 
 0.747
FRAAL1498
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.737
FRAAL0832
Putative anti-sigma factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; factor.
  
     0.661
FRAAL5711
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.642
FRAAL2846
Consrved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.602
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.