STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL2119Putative integral membrane protein; Homologs of previously reported genes of unknown function. (144 aa)    
Predicted Functional Partners:
FRAAL2120
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.951
FRAAL0521
Putative membrane protein (partial); No homology to any previously reported sequences.
  
  
 0.753
cobS
Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
  
    0.727
cobI
Cobalamin biosynthesis protein COBIJ; Function of strongly homologous gene; enzyme.
  
    0.685
FRAAL4044
Membrane protease subunit, stomatin/prohibitin homolog; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
  
 0.665
iam
Isoamylase; Function of strongly homologous gene; enzyme; Belongs to the glycosyl hydrolase 13 family.
       0.572
FRAAL4514
Hypothetical protein; No homology to any previously reported sequences.
     
 0.567
cobE
Precorrin methylase (partial); Function of strongly homologous gene; enzyme.
  
    0.512
treY
Maltooligosyl trehalose synthase ((1, 4)-alpha-D-glucan 1-alpha-D-glucosylmutase); Function of strongly homologous gene; enzyme.
       0.503
FRAAL0785
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.502
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.