STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL2242Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (101 aa)    
Predicted Functional Partners:
FRAAL6353
Putative regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
  
 0.691
FRAAL1615
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.498
FRAAL2241
Putative serine/threonine protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
       0.495
egtD
Conserved hypothetical protein; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family.
   
    0.456
FRAAL1300
Putative integral membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.453
FRAAL6080
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.439
FRAAL6740
Putative hydrolase (partial); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.436
FRAAL3925
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.431
FRAAL6494
Putative regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
     0.430
FRAAL0494
Putative anti-sigma factor kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
    0.423
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.