STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cobGCobalamin biosynthesis protein CobG; Function of strongly homologous gene; enzyme. (548 aa)    
Predicted Functional Partners:
cobI
Cobalamin biosynthesis protein COBIJ; Function of strongly homologous gene; enzyme.
 
 
 0.997
cobH
Precorrin-8X methylmutase (Precorrin isomerase); Function of strongly homologous gene; enzyme.
  
 0.984
cysC
Adenosine 5'-phosphosulfate kinase (partial match); Function of strongly homologous gene; enzyme.
  
  
 0.969
narB
Nitrate reductase (partial match); Function of strongly homologous gene; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.921
cobN
Cobalamin biosynthesis protein cobN; Function of strongly homologous gene; enzyme.
 
   
 0.880
cysG
Uroporphyrin-III C-methyltransferase; Function of strongly homologous gene; enzyme.
  
  
 0.874
cobL
Precorrin-6Y C5,15-methyltransferase (decarboxylating); Function of strongly homologous gene; enzyme.
 
   
 0.848
cobK
Precorrin-6X reductase; Function of strongly homologous gene; enzyme.
 
   
 0.773
cysN
ATP-sulfurylase, subunit 1 (ATP:sulfate adenylyltransferase); May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.771
cysH
3'-phosphoadenosine 5'-phosphosulfate (PAPS) reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
 
  
 0.701
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.