STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL2575Hypothetical protein; No homology to any previously reported sequences. (92 aa)    
Predicted Functional Partners:
FRAAL2573
Hypothetical protein; No homology to any previously reported sequences.
       0.773
FRAAL2574
Hypothetical protein; No homology to any previously reported sequences.
       0.773
FRAAL2572
Putative cyclohexadienyl dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
     
 0.604
FRAAL2557
Non-ribosomal peptide synthetase (Fragment); Function of strongly homologous gene; enzyme.
  
  
 0.519
FRAAL3287
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
     
 0.514
FRAAL2576
Putative site-specific recombinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
    0.500
FRAAL1998
Putative Competence protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.478
FRAAL1954
Hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.433
FRAAL1318
Putative Two-component hybrid sensor and regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
  
 0.430
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.