STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL2718Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (289 aa)    
Predicted Functional Partners:
rnc
Ribonuclease III (RNase III); Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
    
 0.826
FRAAL2717
Hypothetical protein; No homology to any previously reported sequences.
       0.773
FRAAL2719
Hypothetical protein; No homology to any previously reported sequences.
       0.773
FRAAL2720
Hypothetical protein; No homology to any previously reported sequences.
       0.773
FRAAL2716
Hypothetical protein; No homology to any previously reported sequences.
       0.709
FRAAL2722
Putative ribokinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.549
FRAAL2714
Conserved hypothetical protein; No homology to any previously reported sequences.
       0.542
FRAAL2715
Hypothetical protein; No homology to any previously reported sequences.
       0.542
FRAAL2721
Hypothetical protein; No homology to any previously reported sequences.
       0.539
FRAAL2713
Hypothetical protein; No homology to any previously reported sequences.
       0.405
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.