Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
FRAAL2794 | FRAAL2795 | Putative N-acetylmuramoyl-L-alanine amidase precursor (Cell wall hydrolase) (Autolysin); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Hypothetical protein; No homology to any previously reported sequences. | 0.401 |
FRAAL2794 | FRAAL3118 | Putative N-acetylmuramoyl-L-alanine amidase precursor (Cell wall hydrolase) (Autolysin); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Predicted hydrolase or acyltransferase (Alpha/beta hydrolase superfamily); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | 0.416 |
FRAAL2794 | FRAAL4924 | Putative N-acetylmuramoyl-L-alanine amidase precursor (Cell wall hydrolase) (Autolysin); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Hypothetical protein; No homology to any previously reported sequences. | 0.557 |
FRAAL2794 | FRAAL6657 | Putative N-acetylmuramoyl-L-alanine amidase precursor (Cell wall hydrolase) (Autolysin); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | N-acetylmuramoyl-L-alanine amidase (Autolysin); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | 0.482 |
FRAAL2795 | FRAAL2794 | Hypothetical protein; No homology to any previously reported sequences. | Putative N-acetylmuramoyl-L-alanine amidase precursor (Cell wall hydrolase) (Autolysin); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | 0.401 |
FRAAL3118 | FRAAL2794 | Predicted hydrolase or acyltransferase (Alpha/beta hydrolase superfamily); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Putative N-acetylmuramoyl-L-alanine amidase precursor (Cell wall hydrolase) (Autolysin); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | 0.416 |
FRAAL4924 | FRAAL2794 | Hypothetical protein; No homology to any previously reported sequences. | Putative N-acetylmuramoyl-L-alanine amidase precursor (Cell wall hydrolase) (Autolysin); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | 0.557 |
FRAAL6657 | FRAAL2794 | N-acetylmuramoyl-L-alanine amidase (Autolysin); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Putative N-acetylmuramoyl-L-alanine amidase precursor (Cell wall hydrolase) (Autolysin); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | 0.482 |