STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppBDipeptide transport protein 1 (ABC superfamily, membrane); Function of strongly homologous gene; transporter. (333 aa)    
Predicted Functional Partners:
FRAAL2818
Oligopeptide transport ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the ABC transporter superfamily.
 
 0.970
oppD
Oligopeptide transport protein (ABC superfamily, atp_bind); Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily.
 
 0.970
appA
Dipeptide-binding lipoprotein; Function of strongly homologous gene; transporter.
 
 
 0.934
appC
Dipeptide transport protein (ABC superfamily, membrane); Function of strongly homologous gene; transporter.
  
 0.916
oppD-2
Oligopeptide transport protein of the ABC superfamily, ATP-binding component; Function of strongly homologous gene; transporter.
 
 0.876
FRAAL4795
Putative ATP-binding component of an ABC transporter protein (partial); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 0.873
dppD
Dipeptide transport ATP-binding ABC transporter protein; Function of strongly homologous gene; transporter.
 
 0.870
FRAAL4101
Putative membrane component of ABC-type dipeptide/oligopeptide/nickel transport systems; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
 0.865
FRAAL4448
Putative dipeptide/oligopeptide ABC transporter permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
 0.864
FRAAL4087
Putative dipeptide transport protein (ABC superfamily, membrane); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
 0.863
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.