STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL2841Hypothetical protein; No homology to any previously reported sequences. (427 aa)    
Predicted Functional Partners:
livG
High-affinity branched-chain amino acid transport ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.767
FRAAL0330
Putative branched chain amino acid ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.764
FRAAL2623
Hypothetical protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.764
FRAAL3359
Putative Sulfate-transporting ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.764
FRAAL3828
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.764
FRAAL5632
Hypothetical protein; No homology to any previously reported sequences; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.764
livF-2
High-affinity branched-chain amino acid transport protein (ABC superfamily, atp_bind); Function of strongly homologous gene; transporter.
  
  
 0.636
braE-2
High-affinity branched-chain amino acid transport system permease protein braE; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.525
FRAAL1485
Putative permease component of branched-chain amino acid transport system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.525
FRAAL3089
Putative ABC transporter permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.525
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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