STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL3189Putative lysR family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator; Belongs to the LysR transcriptional regulatory family. (348 aa)    
Predicted Functional Partners:
FRAAL6789
Putative LysR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.770
FRAAL4038
Putative LysR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.757
FRAAL3187
Putative acyl-[acyl-carrier protein] desaturase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
   
 0.703
FRAAL3183
Hypothetical protein; No homology to any previously reported sequences.
 
   
 0.677
FRAAL3188
Putative Cytochrome P450; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the cytochrome P450 family.
       0.628
FRAAL3186
Putative fatty acid synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
     0.627
FRAAL3184
Hypothetical protein; No homology to any previously reported sequences.
       0.560
FRAAL3185
Putative Acyl carrier protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; carrier.
       0.560
FRAAL3182
Hypothetical protein; No homology to any previously reported sequences.
       0.549
FRAAL3190
Putative acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.487
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.