Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
FRAAL3309Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (486 aa)    
Predicted Functional Partners:
FRAAL4124
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.628
FRAAL3308
Hypothetical protein-similar to truncated hemoglobins; Homologs of previously reported genes of unknown function.
 
     0.537
FRAAL0034
Conserved hypothetical alanine-rich protein; Homologs of previously reported genes of unknown function.
  
     0.515
FRAAL3307
Hypothetical protein; Homologs of previously reported genes of unknown function.
       0.478
FRAAL3310
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.459
FRAAL3311
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.459
FRAAL3774
Hypothetical protein; No homology to any previously reported sequences.
  
     0.456
FRAAL3306
Putative serine/threonine-protein kinase pkwA; Homologs of previously reported genes of unknown function; enzyme.
       0.453
FRAAL5378
Putative ABC transport system integral membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
     0.449
FRAAL4066
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.447
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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