STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuC-2Alkanesulfonate transport protein (ABC superfamily, membrane) (partial match); Function of strongly homologous gene; transporter. (303 aa)    
Predicted Functional Partners:
ssuB-2
Aliphatic sulfonates transport ATP-binding protein ssuB; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 0.997
ssuA
Sulfonate transport system substrate-binding protein precursor; Function of strongly homologous gene; transporter.
 
 
 0.997
FRAAL0589
Putative alkanesulfonate transport protein (ABC superfamily); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 
 0.992
ssuB
Alkanesulfonate transport protein (ABC superfamily, atp_bind); Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 0.989
ssuD-2
Alkanesulfonate monooxygenase, FMNH(2)-dependent; Function of strongly homologous gene; enzyme.
 
 0.923
ssuC
Alkanesulfonate transport protein (ABC superfamily, membrane); Function of strongly homologous gene; transporter.
  
  
 
0.907
FRAAL5769
ABC-type (ATP-binding cassette-type) ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
 0.872
FRAAL1558
ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
 0.870
FRAAL4251
Putative ATP-binding protein of an ABC transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
 0.856
cysA
NitT/TauT family transport system ATP-binding protein; Function of strongly homologous gene; transporter.
  
 0.849
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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