STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL3398Putative isochorismatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (209 aa)    
Predicted Functional Partners:
FRAAL4263
Putative isochorismatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.768
FRAAL3399
Putative O-succinylbenzoate--CoA ligase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
   0.754
FRAAL2926
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.747
FRAAL3400
Putative acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
   0.733
FRAAL4463
Putative Isochorismatase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
     0.664
FRAAL3397
Putative enoyl-CoA hydratase/isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
   0.637
FRAAL3396
Hypothetical protein; No homology to any previously reported sequences.
  
    0.470
FRAAL3402
Putative dioxygenase hydroxylase component alpha subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
     0.443
nnrD
Putative ribokinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]
  
    0.441
FRAAL3401
Putative dioxygenase component, beta subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.420
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.