STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL3584Putative phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (236 aa)    
Predicted Functional Partners:
FRAAL2867
SAM-dependent methyltransferase involved in tRNA-Met maturation; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.
      0.852
FRAAL3784
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.726
FRAAL0916
Phosphatase (partial); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
  
 0.589
hisE
Phosphoribosyl-ATP pyrophosphatase (PRA-PH); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the PRA-PH family.
      0.581
FRAAL3583
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
     
 0.520
FRAAL6633
Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
  
 0.510
FRAAL1709
Putative Phosphoglycolate phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
  
 0.458
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.