STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL3666Putative Oxidoreductase, short-chain dehydrogenase/reductase family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (281 aa)    
Predicted Functional Partners:
fabF
3-oxoacyl-[acyl-carrier-protein] synthase 1 (Beta-ketoacyl-ACP synthase 1) (KAS 1); Function of strongly homologous gene; enzyme; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.758
fab
3-oxoacyl-[acyl-carrier-protein] synthase II; Function of strongly homologous gene; carrier; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.758
fabH
3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.
  
 
 0.703
FRAAL4077
3-oxoacyl-[acyl-carrier-protein] synthase III; Function of strongly homologous gene; carrier.
  
 
 0.703
FRAAL4649
Putative 3-oxoacyl-[acyl-carrier-protein] synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 
 0.703
fabH-2
3-oxoacyl-[acyl-carrier-protein] synthase III; Function of strongly homologous gene; carrier; Belongs to the thiolase-like superfamily. FabH family.
  
 
 0.703
FRAAL3528
Putative 3-oxoacyl-[acyl-carrier-protein] reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
     0.699
FRAAL6450
Putative short-chain dehydrogenase/reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
     0.682
FRAAL4057
Putative short chain dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
     0.657
FRAAL3059
Hypothetical protein; No homology to any previously reported sequences; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.632
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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