STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL4260Putative glutamyl-tRNA(Gln) amidotransferase, subunit A; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (378 aa)    
Predicted Functional Partners:
gatB
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B); Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.
 
 0.967
FRAAL3108
Putative Coenzyme A ligase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
    
 0.906
acyP
Putative acylphosphatase (Acylphosphate phosphohydrolase); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
    
  0.902
FRAAL3181
Hypothetical protein; No homology to any previously reported sequences.
    
  0.901
FRAAL4264
Putative acetamidase/formamidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 0.898
gatC
Glutamyl-tRNA(Gln) amidotransferase subunit C (Glu-ADT subunit C); Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
 
 0.888
FRAAL0331
Putative amidase protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
     0.773
FRAAL4263
Putative isochorismatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.743
FRAAL4261
Hypothetical protein; No homology to any previously reported sequences.
 
     0.730
guaA
GMP synthetase (glutamine aminotransferase); Catalyzes the synthesis of GMP from XMP.
  
 
 0.711
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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