STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL4275Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (141 aa)    
Predicted Functional Partners:
mutB
methylmalonyl-CoA mutase (MCM); Function of strongly homologous gene; enzyme.
 
  
 0.984
meaA
Coenzyme B12-dependent mutase; Function of strongly homologous gene; enzyme.
  
 0.984
mutA
Methylmalonyl-CoA mutase small subunit (MCM-beta); Function of strongly homologous gene; enzyme.
 
  
 0.981
pcc
Propionyl-CoA carboxylase beta chain (PCCase) (Propanoyl-CoA:carbon dioxide ligase); Function of strongly homologous gene; enzyme.
 
 
 0.980
FRAAL3857
Putative acetyl/propionyl CoA carboxylase beta subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 
 0.975
pccB
Propionyl-CoA carboxylase beta chain 6 (PCCase) (Propanoyl-CoA:carbon dioxide ligase); Function of strongly homologous gene; enzyme.
 
 
 0.975
accC
Biotin carboxylase; Function of strongly homologous gene; enzyme.
  
 
 0.932
accC-2
Acetyl-/propionyl-coenzyme A carboxylase alpha chain [Includes: Biotin carboxylase; Function of strongly homologous gene; enzyme.
  
 
 0.932
accC-3
Acetyl CoA carboxylase, biotin carboxylase subunit (partial match); Function of strongly homologous gene; enzyme.
  
 
 0.932
accC-4
Acetyl-/propionyl-coenzyme A carboxylase alpha chain; Function of strongly homologous gene; enzyme.
  
 
 0.932
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.