STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL4315Putative cation-transporting ATPase I; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter. (1611 aa)    
Predicted Functional Partners:
narB
Nitrate reductase (partial match); Function of strongly homologous gene; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
   
 0.815
FRAAL4316
Hypothetical protein; No homology to any previously reported sequences.
       0.780
FRAAL3784
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.750
FRAAL4317
Putative Proline-rich extensin-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
     
 0.579
FRAAL6315
Hypothetical protein; No homology to any previously reported sequences.
 
  
 0.566
FRAAL2557
Non-ribosomal peptide synthetase (Fragment); Function of strongly homologous gene; enzyme.
  
 
 0.544
FRAAL1581
Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
 0.504
FRAAL1896
Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
 0.504
FRAAL4153
Putative ABC transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 0.504
FRAAL4377
Putative WD-repeat protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
 0.504
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.