Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FRAAL4331Putative transporter substrate-binding protein (partial); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter. (272 aa)    
Predicted Functional Partners:
FRAAL5715
Putative glutamate transport protein (ABC superfamily, membrane); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 
 0.858
gltK
Glutamate permease; Function of strongly homologous gene; enzyme.
 
 
 0.858
FRAAL4332
Hypothetical protein; No homology to any previously reported sequences.
 
  
 0.857
gluA
Glutamate/aspartate transport protein (ABC superfamily, atp_bind); Function of strongly homologous gene; enzyme.
 
 
 0.855
FRAAL2383
Putative amino acid transport protein (ABC superfamily, membrane); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 
 0.849
FRAAL5988
Putative amino acid transport protein (ABC superfamily, atp_bind); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 
 0.848
FRAAL2384
Putative ABC-type transporter ATP-binding protein protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 
 0.847
FRAAL5987
Putative amino acid transport protein (ABC superfamily, membrane); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 
 0.844
FRAAL3891
Putative secreted protein; No homology to any previously reported sequences.
  
 0.747
FRAAL5986
Putative arginine transport protein (ABC superfamily, peri_bind); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
     0.747
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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