STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL4370Putative acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (314 aa)    
Predicted Functional Partners:
ugpE
Sn-glycerol 3-phosphate transport protein (ABC superfamily, membrane); Function of strongly homologous gene; transporter.
       0.545
FRAAL2538
Hypothetical protein; No homology to any previously reported sequences.
 
     0.508
rnc
Ribonuclease III (RNase III); Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
  
    0.451
FRAAL2566
Peptide monooxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
  
 0.433
FRAAL6424
Putative siderophore biosynthesis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
  
 0.433
FRAAL4371
Hypothetical protein; No homology to any previously reported sequences.
       0.409
FRAAL4372
Hypothetical protein; No homology to any previously reported sequences.
       0.409
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.