STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL4439Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (189 aa)    
Predicted Functional Partners:
FRAAL0575
Putative transmembrane oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
     0.734
FRAAL4730
Hypothetical protein; No homology to any previously reported sequences.
  
     0.463
FRAAL4440
Putative keto acyl reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.442
mtnB
Class II aldolase/adducin (partial match); Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Belongs to the aldolase class II family. MtnB subfamily.
 
  
  0.431
FRAAL0531
Putative Tyrosinase (Monophenol monooxygenase); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
     0.408
FRAAL4438
Putative sugar-phosphate dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.407
FRAAL4471
Hypothetical protein; No homology to any previously reported sequences.
  
     0.403
FRAAL0512
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
  0.401
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.