STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL4450Putative Monomeric sarcosine oxidase (MSOX); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (376 aa)    
Predicted Functional Partners:
FRAAL4449
Putative dipeptide/oligopeptide transport protein (ABC superfamily, atp_bind); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the ABC transporter superfamily.
  
  
 0.786
FRAAL4451
Putative FMNH2-utilizing monooxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.697
FRAAL4452
Putative FMNH2-utilizing monooxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.697
FRAAL4453
Putative acetyltransferase (partial); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.697
FRAAL3171
Ferredoxin reductase; Function of strongly homologous gene; enzyme.
  
 
 0.596
gcvT
Aminomethyltransferase (Glycine cleavage system T protein); The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.571
FRAAL4446
Putative ABC transporter dipeptide/oligopeptide binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
   
 0.568
egtE
Hypothetical protein; Probably catalyzes the conversion of hercynylcysteine sulfoxide to ergothioneine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. EgtE subfamily.
      0.543
FRAAL4448
Putative dipeptide/oligopeptide ABC transporter permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
    0.512
FRAAL1555
Putative TenA family transcriptional activator; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family.
 
  
 0.474
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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